Connect Emerging Assemblies in Triticeae by Genes
Species Assemblies Coding Genes Collinear Blocks
13 56 4.1M 12.0M
If use TGT in pulication, please cite:
Yongming Chen, Wanjun Song, Xiaoming Xie, Zihao Wang, Panfeng Guan, Huiru Peng, Yuannian Jiao, Zhongfu Ni, Qixin Sun, and Weilong Guo. (2020) A Collinearity-incorporating Homology Inference Strategy for Connecting Emerging Assemblies in Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era. Molecular Plant, 13, 1694–1708.

News
  • May. 11, 2021   New genome: oat v2 genome annotation

  • Apr. 30, 2021   New genome: IWGSC RefSeqv2.1 genome annotation

  • Mar. 28, 2021   New annotation page is now availity, and the "MicroCollinearity" has been updated

  • Mar. 21, 2021   New genome: rye genome annotation

  • Jan. 29, 2021   New genome: barley pan-genome project genome annotation

  • Dec. 27, 2020   The "MicroCollinearity" has been updated

  • Nov. 26, 2020   New genome: 10+ genome project genome annotation

  • Oct. 12, 2020   New genome: Triticum urartu ASM34745v1 and Brachypodium distachyon IBI v3.0 genome annotation

  • Oct. 8, 2020   New genome: the Tibetan wheat Zang1817 genome annotation

  • Sep. 23, 2020   Cheers! The paper is published in Molecular Plant

  • Aug. 5, 2020   The "By Symbol Name", which can search gene of Triticeae by well-stueied gene of rice, maize, and Arabidopsis, is now available

  • May. 7, 2020   The "MacroCollinearity", which can show collinearity in macro-region, is now available

  • Apr. 15, 2020   The "MicroCollinearity", which can show collinearity in micro-region, is now available

  • Nov. 6, 2019   The "GeneDescription", which can search function annotation and position, is now available

  • Aug. 9, 2019   Triticeae-GeneTribe (TGT) database is now open

Homologues

Homologues

Gene Description

GeneDescription
GeneDescription

Gene Ontology

GOEnrichment

Gene Pair

GenePair

MacroCollinearity

MacroCollinearity

MicroCollinearity

MicroCollinearity