Softwares & Databases

Variome

SnpHub

An easy-to-set-up web server framework for exploring large-scale genomic variation data in the post-genomic era with applications in wheat (GigaScience, 2020)

Wheat-SnpHub-Portal

Genomic variation datasets of wheat and its progenitors
(GigaScience, 2020)

WheatUnion

Wheat Resequencing Variants joint database
(2020, Collaboration)

Germplasm Resources

ggComp

A pairwised comparison method to identify similar genetic regions and shared CNV regions
(Plant Physiology, 2020)

IntroBlocker

Semi-supervised algorithm for ancestral genomic blocks dissection
(Nature Communications, 2022)

WheatCompDB

Genetic Relationship Information Database for Wheat Germplasms (Plant Physiology, 2022)

Pan-genomics

GeneTribe

A tool for performing collinearity-incorporating homology inference
(Molecular Plant, 2020)

Triticeae-GeneTribe

Connect Emerging Assemblies in Triticeae by Genes
(Molecular Plant, 2020)
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